21. GREP Annual Report 2000 sources and its comparison with other sorghum maps. Comparative genome mapping ofsorghum and maize. use bioinformatics to screen these databases for sequences http://www.icrisat.org/text/research/grep/annrep/p6det.htm

22. World Species List - Animals Databases list World PMGifs, NIH, US SEARCH Entrezgenome; animals Australian Catalogue of TaxonomicDatabases (in prep plants and animals occurrence data,maps and models http://species.enviroweb.org/oanimal.html

Add url - Email WSL World Species List Home Envirolink World Species List - Animals Items in this list: 1805 Note: Some categories have url items that last for a very short time (i.e. "Species For Sale"). Sorted by server name without any www. Format is as follows: WHAT species list group (animals, conifers, bacteria, fossils, etc.)? WHY_ nature of list (checklist, collection, sales, book index, etc)? WHERE_ list target (Amazon, Ohio, world, Canada, fossil site, etc.)? WHO_ originator or inheritor of list (WSL is not the owner)? WHEN (not yet) ho(W)_ (not yet) animals extant hemichordata,acorn worms,marine wormlike classification WORLD Christopher B. Cameron, U. of Victoria, CA Classification of the Extant Hemichordata animals chordata,vertebrata,mammals a student model species-accounts site WORLD Animal Diversity Web (ADW), U. of Michigan, US Animal Diversity Web (ADW) ... rare, threatened and endangered alpha list WORLD Animal Info, US animalinfo.org animalinfo xtabb.up022602.htm: animals rare, threatened and endangered alpha list WORLD Animal Info, US animalinfo.org animalinfo

23. Www.sussex.ac.uk/USCS/Archive/Publications/Newsletters/9501.txt on the Computing Service cluster in maps 1A9 Spectroscopy NMR spectra prediction,searching databases of known filarial-genome The Filarial genome Network (or http://www.sussex.ac.uk/USCS/Archive/Publications/Newsletters/9501.txt

24. Table Of Contents agric. Integration of conventional and RFLP linkage maps in rice, III Identificationof a rice BB genome typespecific repetitive DNA sequence, by T. Wu and Ray http://brie2.cshl.org:8082/newsletters/rice_genetics/rgn11/v11tabocont.htm

This is the Gramene Development Site. For the Live Site go here Gramene Home User Survey Database Searches Rice Genome Browser Blast Search Map Search Marker Search ... Documentation Submission Rice Mutants Controlled Vocabularies Rice Resources About Gramene ... What's new Gramene Plant Phys 2002 Grass issue Search: Literature Database Rice Genetics Newsletters Volume 11 Contents RGN 11 Table of Contents Cover p.0 A. Report of the Coordinating Committee of Rice Genetics Cooperative (by M. E. Takahashi and K.J.Lampe), p.7 B. Report of the Committee on Gene Symbolization, Nomenclature and Linkage Groups (by T. Kinoshita), p.8 I. Registration of new gene symbols , p.8 II. List of newly registered gene symbols (1987-1994), p.12 III. Current linkage maps , p.15 IV. Reports from coordinators 1) Gene symbols for blast resistance , newly revised (by T.Kinoshita, T. Inukai and K. Toriyama), p.16 2) Current status of studies of rice organelle genes (by N.Tsutsumi, M. Nakazono, T. Wakasugi, M. Sugiura, K. Kadowaki and A. Hirai), p.18 C. Report of the Committee on Genetic Stocks

25. Research Projects a serious obstacle to generating genetic linkage maps. manifested from burgeoninggenomic databases – for example This showed that a genomewide duplication http://www.plantgenome.uga.edu/projects.htm

Home Search Contact Us Projects ... UGA Links Partner Programs: Genes for Georgia NSF BAC Program Institute for Bioinformatics Center for Biodiversity and Ecosystem Processes ... Cross-cutting topics Sorghum We have made the world’s most detailed molecular map of the sorghum genome, and applied the map to gaining better understanding of many traits important to domestication and improvement of sorghum. Some present activities include: Building a ‘physical’ map of sorghum that is suitable as a framework for sequencing the sorghum genome Taking advantage of the small and well-characterized sorghum genome to better understand the genomes of more complex and less well-characterized grasses such as sugarcane, bermudagrass, and buffelgrass Cloning genes that are central to the domestication of sorghum, and indeed to many crops For more information on sorghum, visit the National Grain Sorghum Producers site . For scientific results of our research, visit the

26. Bookmarks For George The USDA Research Database Agricultural genome Informatiion System (AGIS) Home HomePage UT Library Online Historical maps of the Soil Geographic databases. http://www.yale.edu/fes530a/soil_web_links.htm

Links to Other Sites (Univ of Sussex-Geography) Soil Science Links (Univ Putra, Malaysia) Ecosystems Urban NSF OnLine Documents Land-Use, Fragmentation Agriculture Forests Forest Fragmentation - People in Forested Landscapes: Changing Land Use and Demographics Issue Analysis Project Environment Organizations IGBP (International Geosphere- Biosphere Program) General Information Mexico Biodiversity Info - COMISION NACIONAL PAOCIMIENTO Y USO DE LA BIODIVERSIDAD Environmental Mgmt (DOE) ESSP Home Page ... Environmental Journalism Home Page: Forest links Water Resources/Natural Resources/Hydrology Natural Resources Natural Resources: Government Agencies Water Resources/Hydrology Organizations Wetland Science Institute United States Geological Service (USGS) USGS Water Resources of the United States USGS National Mapping Information: Home Page U.S. Geological Survey Biological Resources Division - USGS Libraries/Journals/Books/Networks/Bibliographic sources/Computer Programs Computer Programs MSDN Online Technologies NOAA Paleoclimatology Program - ITRDB Program Library The ITRDB Program Library Version 2.1

27. Genetic And Genomic Research Of Vitis links to other servers for plant databases and crop Plant genome IV Conference, Town Country Conference Center Genetic Linkage maps of Vitis and QTL Detection http://library.smsu.edu/paulevans/grapegen.shtml

Paul Evans Library of Fruit Science Websites on Genetic and Genomic Research on Grapevine ( Vitis spp.) Research Centers and Institutes Databases Articles and research, by topic General Genomic Research ... Markers and Genetic Mapping Research Centers and Institutes The American Vineyard Foundation (AVF) - A California corporation organized in 1978 by the American Society of Enology and Viticulture as a vehicle to raise funds for research in viticulture and enology. Basic and applied research has made the American grape and wine industry the world's leader. Our vineyards produce grapes of unsurpassed quantity and quality. Bioinformatics.Org - A clearing house of public resources for plant-focused bioinformatics including plant related database, analysis and presentation technologies. Bioinformatics.Org is a non-profit, academe-based organization committed to opening access to bioinformatics research projects, providing Open Source software for bioinformatics by hosting its development, and keeping biological information freely available. Bioinformatics.Org is a community focused on the freedom of information as it pertains to the biosciences, a community sorely needed in our field, one of the most commercial of all scientific endeavors. And there are no doors to this laboratory to lock out the inquisitive based on any social rank. We stand firmly on our conviction that science is for the sake of science and not to be influenced by political and economic forces. The Centre for Plant Conservation Genetics : Areas of research include Grape genome transfer and Grape Genotyping technology. The Centre also hosts a major grape EST database where access may be applied for.

28. New November 2001 - William R. Newman Agriculture Library encoded in the human genome. The sequences can be Includes background information,maps, aerial photographs, a notable are two downloadable databases, one on http://www.umanitoba.ca/libraries/units/agriculture/newnov01.html

William R. Newman Library University of Manitoba Libraries November 2001 Back to the main "New This Week" page Go to this month's New sites or to New E-Journals The following are interesting Agriculture sites AND journals found this month by the William R. Newman Agriculture Library staff. These sites may be incorporated into our regular web site in appropriate sections. NEW SITES ADVANCED CELL TECHNOLOGY www.advancedcell.com/ "Advanced Cell Technology, Inc. is involved in the research and development of the technologies of Nuclear Transfer for human therapeutics and animal cloning." AGRI-FOOD TRADE SERVICE atn-riae.agr.ca/public/home-e.htm "The Agri-Food Trade Service web site is Agriculture and Agri-Food Canada's electronic service providing international trade and market information for Canadian agri-food exporters. It is one of the many initiatives of the Agri-Food Trade Service (ATS)." AGRICULTURE FACT BOOK (USDA) www.usda.gov/news/pubs/fbook00/contents.htm "The Agriculture Fact Book 2000 is a handy reference tool that offers information about U.S. agriculture and describes all USDA programs. It also provides useful information about food safety, nutrition, rural issues, research, education, and natural resources." www.infoscan.com.au/contents/index.html

29. ILAR Journal Vol 39(2-3) Inheritance of Animals (MIA) online at the Web address http//angis.su.oz.au/databases/BIRX/omia CytogeneticsPhysical chromosome maps. Mamm genome 5817 819. http://www4.nas.edu/cls/ijhome.nsf/44bf87db309563a0852566f2006d63bb/ebed89b0c31b

30. P106:4.html A number of cereal molecular maps were constructed as to the remote computer runnningthe databases is also be maintained, in connection to genome database of http://www.grs.nig.ac.jp/wheat/wis/No83/p106/4.html

go to KOMUGI Home go to WIS List go to NO.83 Contents A. Saito and Y. Ogihara Kyusyu National Agric. Exp. Station, Kihara Inst. Biol. Res., Yokohama, City Univ.) Specificity of genomes in cereal plants: some motifs of repetitive sequence in the Gramineae. A number of cereal molecular maps were constructed as based on RFLP markers. We characterized some rice RFLP markers to be homologous or heterologous to other cereal genomes. We found that some regions in rice genome might be putative ancestral genome in cereal. On the other hand, four RFLP markers being a few copied clones exhibited moderately repetitive sequences in most of the Gramineae. Northern analyses revealed these clones to be expressed in cereal leaves. These sequences had no homology to each other and reported genes. RNA folding analyses, revealed that all four clones contain remarkable stem (loop) structure in their sequences. K. Nishikawa (Kihara Mem. Yokohama Found. Adv. Life Sci.) Planning on a new network for wheat genetic resources Agreements at the meeting held three times in 1994 for planning a new network for wheat genetic resources were reported as follows: 1) The network is organized from a center and stations, 2) it is concerned only genetic and experimental lines of

31. Pine Mapping Projects - North America be a multispecies database with special emphasis on image databases. to a number ofresearchers for genome mapping in II Development of genetic maps based on http://www.nal.usda.gov/pgdic/Map_proj/pine.html

32. Nature Publishing Group for eliciting gain or loss of segments of the genome by using systematic presentationof gene descriptions, interactions, mapping data and maps; it was agric. http://www.nature.com/cgi-taf/DynaPage.taf?file=/nrg/journal/v2/n11/full/nrg1101

33. Nature Publishing Group and provided the first detailed genetic maps of all Even before the genome was sequenced,expressed sequence tag and other sequence databases provided evidence http://www.nature.com/cgi-taf/DynaPage.taf?file=/nrg/journal/v3/n5/full/nrg797_r

34. LookSmart - Botany - Mycology to scientists in agric., forestry, medicine Fungal Mitochondrial genome Project Projectaiming Evolutionary Protistology Newsletters, databases, and newsgroups http://canada.looksmart.com/eus1/eus881235/eus881296/eus848582/eus844493/eus8487

35. FORESTRY INFORMATION RESOURCES ON THE INTERNET based services. 2.3 Archives and databases Bibliographies, OPACs and dictionaries,weather maps, library catalogs gov Dendrome forest tree genome mapping digest http://www.metla.fi/pp/JSaa/doc/Nancy94-02.htm

FORESTRY INFORMATION RESOURCES ON THE INTERNET Jarmo Saarikko Finnish Forest Research Institute, Information Systems Group Unioninkatu 40 A, FIN-00170 HELSINKI, Finland ÄThe hypertext-links within this file are still under development. A plain text version is available here Abstract This printed version of the presentation given at EUFORIS'94 comes in the form of a preliminary outline and description for the electronic resources on forestry in the Internet. Thus, the structure of the text is similar to a FAQ (Frequently Asked Questions) or a Resource Guide. It covers discussion groups, electronic publications, electronic archives and databases as well as network access and navigation tools. Publicly available information services are listed as examples. 1. Introduction 2. Forestry information on the Internet 2.1 Discussion Groups Mailing Lists Newsgroups on Usenet Bulletin Boards 2.2 Electronic Publications Newsletters Electronic Journals Mail-based services 2.3 Archives and Databases Bibliographies, OPACs / Libraries

36. Saarikko, J. (1994): Forestry Information Resources On The Internet bibliographies and dictionaries, weather maps, library catalogs etc. The programscreate databases some of which gov Dendrome forest tree genome mapping digest http://www.metla.fi/pp/JSaa/doc/forestry-resources.html

Clearinghouse approved Forestry information resources on the Internet October, 1994. Ä previous version Minor update April 12, 1995. Jarmo Saarikko Finnish Forest Research Institute METLA , EMIT-laboratory, Unioninkatu 40 A, FIN-00170 HELSINKI, Finland Jarmo.Saarikko@metla.fi Contents: Abstract Introduction The Uniform Resource Locator URL Books on Internet ... References and bibliography ABSTRACT INTRODUCTION Internet is currently a decentralised network of national and regional computer networks for research and development. There are over 2 million computers hooked to the Internet, with some 20 million users. In 1993, an estimate of 10000 biologist are reading Usenet newsgroups. There are some 250 newsgroups and 100 mailing lists with interest to biologists ( Smith 1993 ). Internet provides fast and inexpensive means and tools for interaction with colleaques and for finding information from various sources. The most common way to communicate is electronic mail, but online searching and browsing of electronic information sources are becoming more and more daily bread for the common user, too. The exchange of electronic messages between local networks or the geographic location of information are no longer obstacles. ("ftp://nic.switch.ch/docs").

37. The GP Problem: Quantifying Gene-to-phenotype Relationships increasing availability of the complete genome sequences of Pathway databases A casestudy in computational sources and its alignment with other sorghum maps. http://www.bioinfo.de/isb/2002/02/0013/main.html

In Silico Dagstuhl Seminar "Functional Genomics" The GP problem: Quantifying gene-to-phenotype relationships Mark Cooper , Scott C. Chapman , Dean W. Podlich and Graeme L. Hammer School of Land and Food Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia Current Address: Pioneer Hi-Bred International Inc., 7300 N.W. 62 nd Avenue, P.O. Box 1004, Johnston, Iowa 50131, USA CSIRO Plant Industry, 120 Meiers Road, Indooroopilly, Queensland 4068, Australia Agricultural and Production Systems Research Unit (APSRU), Queensland Department of Primary Industries, Tor Street, Toowoomba, Queensland, Australia *Corresponding author: Email: mark.cooper@pioneer.com Edited by E. Wingender; received September 26, 2001; revised and accepted December 21, 2001; published January 24, 2002 Abstract In this paper we refer to the gene-to-phenotype modeling challenge as the GP problem. Integrating information across levels of organization within a genotype-environment system is a major challenge in computational biology. However, resolving the GP problem is a fundamental requirement if we are to understand and predict phenotypes given knowledge of the genome and model dynamic properties of biological systems. Organisms are consequences of this integration, and it is a major property of biological systems that underlies the responses we observe. We discuss the E(NK) model as a framework for investigation of the GP problem and the prediction of system properties at different levels of organization. We apply this quantitative framework to an investigation of the processes involved in genetic improvement of plants for agriculture. In our analysis

38. Mail Thread Index List Indigenous Knowledge, Preston Hardison; (0) Re databases, Gabriel Hegyes; (0) Re Where is USDA zone maps?, Steve Prowten; 0) New Plant genome Gopher, Andy http://www.ibiblio.org/london/agriculture/links/1/threads.html

Mail Thread Index Main Index no subject (file transmission) Adam Finkelstein no subject (file transmission) Adam Finkelstein Re: [l/m 10/6/92] FAQ on FAQs n.g.FAQ hartman No Subject No Subject No Subject No Subject ... Re: [l/m 10/6/92] FAQ on FAQs n.g.FAQ hartman Composing CD's S. A. Modena Rural Datafication GABRIEL HEGYES Not Just Cows by Wilfred Drew Public Gopher Account Call for Stories Reasons to Build the GABRIEL HEGYES Re: Product Label Database? Mark Tooley UNCED resources collection ngonet Judy Hallman INTERAG/International Ag. Database, Illi Gabriel Hegyes Cornell's CENET now available (fwd) Gabriel Hegyes Re: Sustainable Development Lists Larry London No Subject Steve Cisler New List: Indigenous Knowledge Preston Hardison Re: databases Gabriel Hegyes EPA on the Internet (GOPHER Server up) ( Gabriel Hegyes EPA on the Internet (GOPHER Server up) ( Gabriel Hegyes No Subject WHITE HOUSE HEALTH LIST ONLINE Steve Freedkin No Subject Larry London No Subject RFD: sci.agriculture (fwd) Tom Hodges (moderated newsgroup) sanet-mg Usage almanac-admin EPA Information (long and readable) JIM WHITTINGTON 404-347-2316 New Mailing groups for Soils and AgModel David B. Hannaway

39. Mail Index EDU . Re Seeking sources of botanical, horticultural databases Josh Hartmann).Re Where is USDA zone maps? Florence ron@mlfarm.com . New Plant genome Gopher http://www.ibiblio.org/london/agriculture/links/1/maillist.html

Mail Index Thread Index no subject (file transmission) From no subject (file transmission) From Re: [l/m 10/6/92] FAQ on FAQs n.g.FAQ From : hartman@uLogic.netcom.com No Subject From No Subject From No Subject From No Subject From Re: [l/m 10/6/92] FAQ on FAQs n.g.FAQ From : hartman@uLogic.netcom.com Composing CD's From : samodena@csemail.cropsci.ncsu.edu (S. A. Modena) Rural Datafication From Not Just Cows by Wilfred Drew From : gopher@twosocks.ces.ncsu.edu (Public Gopher Account) Call for Stories Reasons to Build the NII From Re: Product Label Database? From : tooley@stat.ncsu.edu (Mark Tooley) UNCED resources collection From : ngonet@CHASQUE.APC.ORG From INTERAG/International Ag. Database, Illinois CES (fwd) From Cornell's CENET now available (fwd) From Re: Sustainable Development Lists From No Subject From New List: Indigenous Knowledge From Re: databases From EPA on the Internet (GOPHER Server up) (fwd) From EPA on the Internet (GOPHER Server up) (fwd) From No Subject From WHITE HOUSE HEALTH LIST ONLINE From No Subject From No Subject From RFD: sci.agriculture (fwd)

40. Gemini Detective Merremia Mosaic Virus - Puerto Rico (MeMV-PR) Site Index Home , Site Search. databases Techinical Information -, Primer maps.-, PCR Conditions. Probable Origin Puerto Rico. genome ssDNA; bipartite. http://gemini.biosci.arizona.edu/descriptions/memv-pr/memv.html

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